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Browsing by study line "Växtproduktionsvetenskaper"

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  • Ahlberg, Juho (2021)
    Ruokasipuli (Allium cepa Cepa-ryhmä L.) on maailmanlaajuisesti merkittävä viljelykasvi ja Suomessa se kuuluu tärkeimpiin puutarhakasveihin. Suomessa sipulia viljellään pääasi-assa tuonti-istukkaista, joissa on havaittu useita sipulia vioittavia Fusarium -lajeja. Sipulilla taudit aiheuttavat merkittäviä tappioita, joten jotkut viljelijät ovat siirtyneet viljelemään si-pulia itsetuotetuista taimista tautiriskin vähentämiseksi. Sipulin kylväminen suoraan avo-maalle voisi kuitenkin olla edullisempi vaihtoehto, mutta osaa Ahvenanmaata lukuun otta-matta kasvukausi ei ole tähän riittävä Suomessa. Samco-tekniikka on alun perin maissille kehitetty viljelytekniikka, jossa siemenet kylvetään valossa hajoavan muovin alle. Mene-telmä voi valmistajan mukaan mahdollistaa pitkää kasvukautta vaativien kasvien viljelyn entistä pohjoisemmassa. Tämän tutkielman tavoitteena oli selvittää kylvösipulin viljelyn mahdollisuuksia Suomessa Samco-tekniikan avulla, sekä selvittää kylvötiheyden vaikutusta sipulin satoon ja sen kokojakaumaan. Koejärjestely oli satunnaistettujen lohkojen osaruutukoe, jossa pääruudut muodostuvat neljästä kylvötiheydestä ja osaruudut viljelymenetelmästä, joita on kaksi; Samco-tekniikka ja perinteinen kylvösipuli. Koeruuduilta korjatuista sipuleista määritettiin kauppakelpoinen sato, kokojakauma sekä viallisten sipuleiden osuus kokonaissadosta. Vil-jelymenetelmän ja kylvötiheyden vaikutukset sadon määrään, sen kokojakaumaan ja vial-listen sipuleiden määrään selvitettiin kaksisuuntaisella varianssianalyysillä. Samco-tekniikka alensi kokonaissatoa 26 % verrattuna perinteiseen kylvösipuliin, lisäksi Samco-tekniikka tuotti pienempikokoisia sipuleita. Kylvötiheys ei vaikuttanut sadon koko-naismäärään, mutta suurin kylvötiheys lisäsi pienikokoisen sipulin osuutta sadosta sekä Samco-ruuduilla, että kontrolleissa. Rikkakasvitorjunta Samco-tekniikan yhteydessä osoit-tautui vaikeaksi, ja menetelmän negatiiviset vaikutukset satoon johtuvat todennäköisesti li-sääntyneestä kilpailusta rikkakasvien kanssa. Koelohkolla esiintyi huomattavasti juolaveh-nää (Elymus repens L.) ja peltovillakkoa (Senecio vulgaris L.). Tämän tutkimuksen perus-teella Samco-tekniikka tuomaa hyötyä kylvösipulin viljelyyn ei voida arvioida koejärjeste-lyn puutteiden takia. Lisätutkimus rikkakasvitorjunnan vaikutuksesta Samco-tekniikalla viljeltyyn kylvösipuliin olisi kuitenkin tarpeen.
  • Hämäläinen, Aino (2019)
    Tomatoes (Solanum lycopersicum) are one of the most important food crops in the world. Long supply chains force producers to harvest the fruit before ripening. Ripening then happens in super markets or at the end–consumer. Partly due to the early harvest, tomatoes are perceived flavorless, especially in the wintertime. In addition to a demand for more flavorful produce, consumers are also increasingly interested in healthy food and are looking at the nutritional value of their food before the price tag. As tomatoes are a major crop, they could potentially also contribute to the daily nutrient intake of consumers, such as lycopene, which is i.e. suggested to have preventative qualities towards cancer. Several studies have been conducted to find out how light emitting diodes (LED –lights) could influence the plant and its compounds during growth, but post-harvest research to a lesser extent. Research on post-harvest LED–lighting suggests that quality attributes could also be influenced post-harvest. Important parameters to look at are color and firmness, as they are what buying decisions are primarily based on. Further, lycopene, but also total soluble sugars (TSS) and titratable acidity (TA), and especially their ratio, which defines how tomato flavor is perceived, are worth studying. Therefore, this study aimed to find out, how LED–light treatments could be used to steer the post-harvest quality of tomatoes. Three continuous light treatments were used; Blue, far-red, a standard growing light with high red to far-red ratio and dark as control. The study was done on two cultivars by measuring TSS, TA, lycopene, vitamin C and firmness of the tomatoes every fourth day for 12 and 15 days. Additionally, a set of tomatoes was analyzed for changes in weight and color. The results suggest that LED-lights do influence the quality characteristics of tomato fruit. Blue light seemed to decrease firmness, but to increase lycopene. Lycopene accumulation was also enhanced by a high red to far-red ratio, whereas far-red had a reversing effect. Both blue and high red to far-red ratio treatments increased the chroma values, making the tomatoes brighter in color. Far-red seemed to enhance red color development and to retain firmness, but to decrease lycopene accumulation and to make the color duller. Tomatoes kept in the dark had low lycopene content and a dull coloration. Results on TSS and TA indicate differences in genotype responses, which further underlines the need for further research on the topic and especially the effect of cultivar. The results of the study indicate that tomatoes should not be kept in the dark during storage, as then the full potential of their external and internal quality will not be reached. High red:far-red ratio lighting increases lycopene and brightens the coloration, and could be considered to be used during storage. However, other external factors affecting quality, such as ethylene and temperature, should be included in the future research to study their effect and correlation with light in regard to tomato fruit quality.
  • Sultana, Dalia Mrs (2021)
    Anthocyanins are an important class of flavonoids under the class of phenolic compounds and contribute to flower color variation. Gerbera hybrida is a flowering plant of Asteraceae family having mainly two colors of flowers – orange and red. Dihydroflavonol 4-reductase (DFR) is a key enzyme catalyzing a reaction in anthocyanin biosynthesis, the reduction of dihydroflavonols to leucoanthocyanidins. GDFR1-2 and GDFR1-3 are two allelic forms of gerbera DFR differing in substrate specificity for the dihydroflavonols - dihydrokaempferol, dihydroquercetin and dihydromyricetin and also differ in 13 amino acids where eight are considered to be important for substrate specificity. GDFR1-2 has strong preference for dihydrokaempferol and GDFR1-3 doesn’t have any preference for the three substrates. In order to find out the amino acids responsible for substrate specificity, swap mutations were generated between GDFR1-2 and GDFR1-3 by two PCR methods– first, running separate PCR from the templates of GDFR1-2 and GDFR1-3, making a heteroduplex by mixing separate PCR where non-matching nucleotides are expected to be corrected by E. coli and, second, by running PCR from mixed templates with short extension time of PCR to make swaps by template switching. The second method was found more effective than the first method. 81 lines (named GDAT1-81) were sequenced and 35 unique swap mutants were found. In this work the DFR assay was done from six randomly picked GDAT lines where GDAT5 had a swap in one amino acid showing still a similar pattern of substrate specificity as the reference (GDFR1-3) indicating that the mutated amino acid doesn’t have any role in substrate specificity. GDAT14 had an extra mutation (S167P) along with 2 swaps showing incapability of reducing dihydrokaempferol, demonstrating that the mutated amino acids are important and other 4 lines were identical to either GDFR1-2 or to GDFR1-3. This was a preliminary test with 6 lines. In order to get more explanations about the roles of amino acids in substrate specificity, DFR assay was done for all the 81 lines in experiments outside of this thesis and five patterns of substrate specificity were identified indicating that substrate specificity of DFR can be altered by changing only three important amino acids. The amino acids at the position 85,135 and 181 in DFR coding sequence have been identified having important roles in substrate specificity. In addition, the amino acid at position 167 may have a function in making the gerbera DFR able to reduce dihydrokaempferol.
  • Rashid, Mamunur (2021)
    Secondary metabolites are bioactive compounds that help the plant to adapt in different adverse environmental conditions but are not an essential part of plant developmental processes and also secondary metabolites have pharmaceutical value because of their antioxidant, anticancer, antibacterial and antifungal properties. Type-III polyketide synthases (PKSs) are a group of polyketide synthases that produce secondary metabolites with diverse biological activities in plants. The main objective was to localize the PKSs G2PS1, G2PS2, FvCHS2-1, HlVPS into the peroxisomes for synthesizing secondary metabolites in plants. The experiment was performed by amplifying the genes with specific Px-targeting signal. Then the genes cloned into destination vector pEAQ-HT-DEST1. The plasmid constructs were transformed to Agrobacterium tumefaciens and agro-infiltrated to Nicotiana benthamiana and Petunia hybrida leaf tissue. Western blotting results revealed that all proteins were expressed in infiltrated leaves of both tobacco and petunia but HPLC chromatograms showed that only the protein FvCHS2-1 produced novel peaks for metabolites in tobacco.
  • Härkönen, Aino (2019)
    Biochars are soil amendment materials produced via pyrolysis of biomass. They are resistant to degradation and can be used as a way to sequester carbon from the atmosphere. Biochars can improve soil structure and water and nutrient retention capacity, and significant positive effects on soil aggregate stability, water retention capacity and nutrient availability have been observed in acidic soils with low carbon content. The positive effects of biochar on soil properties can also increase crop yields. However, most studies on the effects of biochar have been conducted in tropical or temperate climates, and currently very little is known on its effects on the yield formation of cereals, and more specifically, barley. The aim of this study was to determine the effects of softwood biochar on field soil moisture and nutrient contents, as well as its effects on yield components of barley (Hordeum vulgare L.) 8 years after its application (0, 5, 10, 20 and 30 t ha-1) to boreal soil. In addition, the effects of organic and mineral fertilizers, alone and together with biochar, on soil moisture, nutrient contents and barley yield components were studied. Biochar did not have significant effects on soil moisture or nutrient contents or on barley yield components. Fertilization had significant effects on contents of soil moisture and nutrients, electrical conductivity, pH and the biomass, leaf chlorophyll content, number and weight of seeds and the final yield of barley. The non-significant effects of biochar can be due to the high amount of carbon already present in the soil, and similar results have been observed on the research site in previous years. The added biochar may also have been misplaced by soil management or degraded by weathering. The growing season of 2018 was drier and warmer than the long-term average and drought during the beginning of the growing season combined with issues with weeds negatively affected crop development and yield components.
  • Savela, Mailis (2020)
    Paineistettu kuumavesiuutto on menetelmä, jossa rahkasammaleesta saadaan uutettua arvokkaita ainesosia veteen ympäristöystävällisesti. Rahkasammaleesta uutetulle nesteelle on olemassa monia jatkojalostusmahdollisuuksia esimerkiksi erilaisten kemikaalien raaka-aineena. Rahkasammaleen uuttoprosessissa syntyy uuton läpikäynyttä rahkasammalmateriaalia, jolle olisi taloudellisesti kannattavaa löytää jatkokäyttöä, mikäli rahkasammaleen uuttoa harjoitettaisiin teollisessa mittakaavassa. Kokeessa tutkittiin uuttoprosessin läpikäyneen rahkasammaleen sopivuutta kasvien kasvualustamateriaaliksi. Uutettua rahkasammalta sekoitettiin käsittelemättömään rahkasammaleeseen 100:0, 75:25, 50:50, 25:75 ja 0:100 kuivapainon suhteessa ja niiden vedenpidätyskykyä, sähkönjohtokykyä ja pH:ta seurattiin kasvihuonekokeessa. Kontrollikäsittelynä toimi turve. Lisäksi seurattiin kasvualustan vaikutusta basilikan taimettumiseen, pituuskasvuun, lehtien lukumäärään sekä kuiva- ja tuorepainon kertymiseen. Viljelyn aikana seurattiin myös mahdollisten kasvua inhiboivien yhdisteiden poistumista kasvualustoista, kun niitä huuhdeltiin neljä kertaa laimealla lannoiteliuoksella. Jatkokokeessa seurattiin uutetun rahkasammaleen vaikutusta yksi-, kaksi- ja monisirkkaisten testikasvilajien taimettumiseen ja tuorepainon kertymiseen. Uutettu rahkasammal ei sopinut basilikan kasvualustaksi tai sen osaksi, sillä siinä kasvaneiden kasvien kasvu oli erittäin heikkoa. Sen sijaan käsittelemättömässä rahkasammaleessa basilika kasvoi yhtä hyvin kuin turpeessa. Uutetun sammaleen vedenpidätyskyky oli selvästi matalampi kuin käsittelemättömän rahkasammaleen. Jatkokokeessa yksi- ja kaksisirkkaisilla testikasvilajeilla parhaan tuorepainon tuotti käsittelemätön rahkasammalalusta, ja 25 % uutettua rahkasammalta sisältävä alusta tuotti paremman kasvun kuin turve ja 50 % tai enemmän uutettua rahkasammalta sisältäneet alustat. Monisirkkaisten kasvien kasvu ei heikentynyt, vaikka kasvualustassa oli 25 % uutettua sammalta. Useimpien kasvilajien taimettuminen oli heikompaa ja hitaampaa 100 % ja 75 % uutettua sammalta sisältäneillä kasvualustoilla kuin käsittelemättömässä rahkasammaleessa ja 25 % uutettua sammalta sisältäneessä kasvualustassa. Uutetun rahkasammaleen kasvua inhiboiva vaikutus ei täysin selity sen fysikaalisilla ominaisuuksilla, kuten esimerkiksi heikolla vedenpidätyskyvyllä. Uuttoprosessin aikana on saattanut syntyä jokin kasvua inhiboiva yhdiste, jonka pitoisuus alustassa ei vähentynyt riittävästi, vaikka uutettua sammalta sekoitettiin käsittelemättömään rahkasammaleeseen.
  • Johansson, Annika (2021)
    Pyrenophora tritici-repentis (Ptr) and Parastagonospora nodorum (Pn) are necrotrophic fungal pathogens responsible for foliar diseases tan spot (TS) and stagonospora nodorum blotch (SNB) of wheat (Triticum aestivum L.), respectively. Both Ptr and Pn harbour necrotrophic effectors (NEs) to promote disease development. NEs elicit symptoms in the host in an inverse gene-for-gene manner, in which the recognition of NE by the host carrying a corresponding sensitivity allele leads to disease susceptibility. Ptr and Pn are prevalent in spring wheat fields in Finland, but Finnish spring wheat cultivars do not currently possess high level of resistance to either pathogen. The main objective of this study was to validate selection tools for TS and SNB resistance in Finnish spring wheat breeding program. A total of 150 spring wheat accessions were genotyped with six literature-derived Kompetitive Allele Specific PCR (KASP) markers associated with sensitivities to four NEs ToxA, ToxB, SnTox1 and SnTox3. A subset of 63 spring wheat accessions were further tested for their sensitivity to ToxA, SnTox1 and SnTox3, and for TS and SNB susceptibility at the seedling stage by artificial inoculation assays with fungal isolate mixtures. Field data on adult plant susceptibility was derived from official variety trials and from disease screenings carried out within a spring wheat breeding program at Boreal Plant Breeding Ltd. The association of KASP markers and NE sensitivities with seedling and adult plant susceptibility was tested, as well as the correlation of disease susceptibility at the seedling stage and in adult plants. ToxA sensitivity was found to have a significant role in TS susceptibility both at the seedling stage and in adult plants, suggesting that removing of ToxA sensitivity would result in spring wheat lines more resistant to TS. KASP marker for ToxA sensitivity was found to be tightly linked to TS susceptibility, thus serving an effective tool for TS resistance selection. ToxA and SnTox3 sensitivities were found to be important factors in SNB susceptibility at the seedling stage, and KASP markers for ToxA and SnTox3 sensitivities were associated with adult plant susceptibility. TS and SNB resistance were found to be complex traits, and further research is needed to better evaluate the role of NE sensitivities and other factors affecting disease susceptibility. This study provides the first insight into the role of NE sensitivities in TS and SNB susceptibility in Finnish spring wheat, and results obtained in this study are directly applicable for TS and SNB resistance breeding in Finnish spring wheat breeding programs.
  • Ojala, Birita (2021)
    The american cranberry (Vaccinium macrocarpon) is a woody perennial plant. Cranberry fruit has been studied for its many different health benefits due to the high level of human health-promoting compounds such as flavonoids and anthocyanins. The growing season is too short in Finland, and the fruits must be harvested before frost. Studies have shown that post-harvest lighting can affect the quality of fruits. Light treatment increases the anthocyanins content and red color in fruits. Lighting during storage might improve also shelf life. The aim was to find out how different light treatments affect different quality characteristics of fruits. In this thesis, the effect of three different light treatments on the accumulation of anthocyanins and phenols during 14 days following harvest in american cranberry fruits was investigated. The light treatment was APL (multispectrum), blue and red light. The control was dark treatment. In addition, the color of the fruits, the sugar content and titratable acids were measured. Light treatments increased anthocyanin content in all varieties compared to dark control. The most effective was APL treatment. The phenol content first (7 days) increased in all varieties, after which the increase continued only in Early Black and Howes varieties. There were statistically significant differences between the light treatments only for these varieties, but only 14 days after the treatments. The treatment did not have significant effect on sugar content or the titratable acids. The berries turned red in light treatments and the color intensity increased. The treatments differed significantly from the dark, but not with each other. The results of this thesis indicate that it would be possible to ripen cranberry fruits during storage. The berries could be harvested half ripe and ripened during storage using lights. There would also be a demand for domestic cranberries in the food industry, allowing imported cranberries to be replaced by a domestic alternative.
  • Virtanen, Julia (2021)
    ABSTRACT Tiedekunta/Osasto - Fakultet/Sektion 3⁄4 Faculty Faculty of Agriculture and Forestry  Osasto - Sektion - Department Department of Agricultural Sciences Tekijä - Författare - Author Julia Virtanen Työn nimi - Arbetets titel - Title Farmers and biodiversity Oppiaine - Läroämne - Subject Agricultural sciences, agroecology Työn laji - Arbetets art - Level M.Sc. Thesis  Aika - Datum - Month and year February 2021  Sivumäärä 3⁄4 Sidoantal 3⁄4 Number of pages 45 pages Tiivistelmä - Referat - Abstract The aim of this study was to identify farmers' opinions about biodiversity and compare their opinions with the measured biodiversity data from their own fields. The goal was to find out what are the main reasons for biodiversity conservation and what kinds of farming activities were seen as most important tools to conserve farmland biodiversity. This study was executed as a commission to the Finnish Environment Institute as a part of JustFood -research project. There were 33 farmers representing both organic and conventional farming. The results showed that there wasn't statistically significant difference between the two farming types regarding farmers' appreciation of biodiversity. The biodiversity data and overall farmers' appreciation values included scattering between farming types and within both groups. The most of the farmers stressed the importance of ecosystem services as a reason to conserve biodiversity. A third of the farmers emphasized the intrinsic value of biodiversity. Altogether, farmers in this study were rather interested in conserving biodiversity in their own farms regardless of the farming type or cultivated crops. Avainsanat - Nyckelord - Keywords biodiversity, farmer perceptions, agroecosystems, biodiversity conservation, JustFood Säilytyspaikka - Förvaringsställe - Where deposited Master's Programme in Agricultural Sciences, Department of Agricultural Sciences Muita tietoja - Övriga uppgifter - Further information Mikko Kuussaari (SYKE), Marjaana Toivonen (SYKE and the University of Helsinki), Iryna Herzon (University of Helsinki) HELSINGIN YLIOPISTO - HELSINGFORS UNIVERSITET - UNIVERSITY OF HELSINKI
  • Koskinen, Elisa (2021)
    Cropping conditions are changing also at northern areas due the climate change. Extreme weather conditions demand more buffering capability from the soil and adjusting ability from the plants. Crop rotation and tillage system are in essential role while the change proceeds, as they effect to productivity, pest control and soil health. This study studied the effects of crop rotation on spring barley (Hordeum vulgare L.) yield and pests in two tillage methods, plowing and no-till. This long term (2005-2019) field experiment was arranged in Jokionen, southern Finland. In the experiment, there were two cropping systems: barley monoculture and five years crop rotation (pea – spring wheat – oats – turnip rape/rapeseed – spring barley). Both cropping systems were carried out in ploughed and no-till environment. This study examined the years 2009, 2014 and 2019, when the whole experimental area was on spring barley. In our study, crop rotation did not have considerable effect on barley yield, but tillage method had. Yields were bigger in the ploughed system than in the no-till system. Crop rotation reduced weeds in the plowing system and increased them on no-till. Crop rotation reduced the stem and root rot diseases in spring barley. Tillage method and crop rotation had also effect on leaf blotch severity, especially on scald (Rhynchosporium commune). Only a few insect violations appeared during the examination years, so the effects of crop rotation on occurrence of insects could not be evaluated. Long term crop rotation experiments give valuable information about the strengths and weaknesses of different rotations. Role of the diverse crop rotation will increase further in Finland. More attention needs to be paid to interaction between crops and tillage systems, avoiding soil compaction, focusing to improve soil health and structure so the plants would have good opportunities to use their whole yield potential.