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Distributed approach to analyze physiological time series signals in medical telemetry

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Title: Distributed approach to analyze physiological time series signals in medical telemetry
Author(s): Singh, Maninder Pal
Contributor: University of Helsinki, Faculty of Science, Department of Computer Science
Discipline: Computer science
Language: English
Acceptance year: 2016
Abstract:
Research in healthcare domain is primarily focused on diseases based on the physiological changes of an individual. Physiological changes are often linked to multiple streams originated from different biological systems of a person. The streams from various biological systems together form attributes for evaluation of symptoms or diseases. The interconnected nature of different biological systems encourages the use of an aggregated approach to understand symptoms and predict diseases. These streams or physiological signals obtained from healthcare systems contribute to a vast amount of vital information in healthcare data. The advent of technologies allows to capture physiological signals over the period, but most of the data acquired from patients are observed momentarily or remains underutilized. The continuous nature of physiological signals demands context aware real-time analysis. The research aspects are addressed in this thesis using large-scale data processing solution. We have developed a general-purpose distributed pipeline for cumulative analysis of physiological signals in medical telemetry. The pipeline is built on the top of a framework which performs computation on a cluster in a distributed environment. The emphasis is given to the creation of a unified pipeline for processing streaming and non-streaming physiological time series signals. The pipeline provides fault-tolerance guarantees for the processing of signals and scalable to multiple cluster nodes. Besides, the pipeline enables indexing of physiological time series signals and provides visualization of real-time and archived time series signals. The pipeline provides interfaces to allow physicians or researchers to use distributed computing for low-latency and high-throughput signals analysis in medical telemetry.


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