| dc.date.accessioned |
2017-06-19T14:39:24Z |
und |
| dc.date.accessioned |
2017-10-24T12:24:26Z |
|
| dc.date.available |
2017-06-19T14:39:24Z |
und |
| dc.date.available |
2017-10-24T12:24:26Z |
|
| dc.date.issued |
2017-06-19T14:39:24Z |
|
| dc.identifier.uri |
http://radr.hulib.helsinki.fi/handle/10138.1/6118 |
und |
| dc.identifier.uri |
http://hdl.handle.net/10138.1/6118 |
|
| dc.title |
Evaluation of the reference-free SNP detection tool DiscoSnp |
en |
| ethesis.department.URI |
http://data.hulib.helsinki.fi/id/225405e8-3362-4197-a7fd-6e7b79e52d14 |
|
| ethesis.department |
Institutionen för datavetenskap |
sv |
| ethesis.department |
Department of Computer Science |
en |
| ethesis.department |
Tietojenkäsittelytieteen laitos |
fi |
| ethesis.faculty |
Matematisk-naturvetenskapliga fakulteten |
sv |
| ethesis.faculty |
Matemaattis-luonnontieteellinen tiedekunta |
fi |
| ethesis.faculty |
Faculty of Science |
en |
| ethesis.faculty.URI |
http://data.hulib.helsinki.fi/id/8d59209f-6614-4edd-9744-1ebdaf1d13ca |
|
| ethesis.university.URI |
http://data.hulib.helsinki.fi/id/50ae46d8-7ba9-4821-877c-c994c78b0d97 |
|
| ethesis.university |
Helsingfors universitet |
sv |
| ethesis.university |
University of Helsinki |
en |
| ethesis.university |
Helsingin yliopisto |
fi |
| dct.creator |
Söderholm, Marcus |
|
| dct.issued |
2017 |
|
| dct.language.ISO639-2 |
eng |
|
| dct.abstract |
As sequencing costs decline and an increasing amount of genetic data without reference genome is produced there is a need for new reference-free methods for detecting genetic variation. This thesis defines the biological problem of variant detection, introduces some of the tools previously used for solving the issue, and takes an in-depth look at the new reference-free method DiscoSnp. Several test cases were run to assess the programs performance with different input variables. |
en |
| dct.language |
en |
|
| ethesis.language.URI |
http://data.hulib.helsinki.fi/id/languages/eng |
|
| ethesis.language |
English |
en |
| ethesis.language |
englanti |
fi |
| ethesis.language |
engelska |
sv |
| ethesis.thesistype |
pro gradu-avhandlingar |
sv |
| ethesis.thesistype |
pro gradu -tutkielmat |
fi |
| ethesis.thesistype |
master's thesis |
en |
| ethesis.thesistype.URI |
http://data.hulib.helsinki.fi/id/thesistypes/mastersthesis |
|
| ethesis.degreeprogram |
Bioinformatics |
en |
| dct.identifier.urn |
URN:NBN:fi-fe2017112251307 |
|
| dc.type.dcmitype |
Text |
|
