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Browsing by discipline "Biotekniikka (METSÄ)"

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  • Baral, Bikash (2015)
    Phytopathogens, notably Heterobasidion annosum, evolved several strategical combinations to infect and subsequently colonize their host even under different stress conditions. Fungal ABC transporters are well-known defenses that can confer resistance against host-secreted secondary metabolites by transporting them outside of the fungal cells and thus keeping their intracellular concentration low. Here, we aim to unveil the evolutionary trajectories of total ABC transporters-encoding genes in Heterobasidion annosum. The gene expression pattern was monitored with the fungus subjected to different chemical stressors and during fungal growth on wood. We identified 32 putative ABC protein-encoding genes in the Heterobasidion genome. Altogether 20 putative ABC transporter-encoding genes of H. annosum were further analyzed and it was revealed that several genes were either up or downregulated, while some were not differentially expressed under the experimental conditions. The results obtained from the gene expression analysis revealed that an ABC gene (annotated as Ha.ABC-G1 or Hetan_66124), was highly up-regulated in most conditions. This particular transporter-encoding gene (Hetan_66124) with induction level of up to 47 –fold (in heartwood and similar levels in other conditions) was traced, PCR amplified, cloned in Escherichia coli and expression of recombinant protein performed using Saccharomyces cerevisiae as platform. Several experiments aiming to dissect functional roles of this hypothetical protein were performed. The growth of the yeast transformant over expressing the recombinant ABC protein in different terpenoids and weak organic acids were monitored. The growth rate of clones with and without transporters were not significantly different when cultured in plates (SC·gal-ura-) that were exposed to the volatile compounds (limonene, carene and ?-pinene). Based on our findings, we concluded that the yeast transformants carrying the H. annosum ABC-G1 transporter encoding gene do not show increased resistance or tolerance against the monoterpenes. The results of the transcript profiling have further contributed to our understanding about gene expression during fungal colonization upon exposure to chemical stressors. However, further studies are needed in order to specifically unveil the functional roles of these efflux pumps that underlie their transport mechanism with response to the host secreted secondary metabolites.
  • Hristozova, Nevena (2012)
    The white rot fungus Heterobasidion annosum s.l. is a basidiomycete which is considered to be the most economical important pathogen of conifer trees (Pinus, Picea and Abies) in the northern hemisphere. Presently, the knowledge on the biology and molecular aspects of the Heterobasidion pathosystem is still poor and this is the major set-back in preventing the spread of the pathogen. A deeper investigation at the molecular level of the pathogenicity factors involved during the infection process is very important to better control the disease. Intra-cellular signal-transduction pathways, and in particular the Mitogen Activated Protein Kinases (MAPKs), have been shown to play key roles in the infection cycle in many fungal pathogens, being pivotal in survival, appressorial formation, sporulation and response to various biotic and abiotic stresses. The aim of this study is to characterize a specific H. annosum MAPK, with high sequence homology to FUS3 gene (involved in mating) in S. cerevisiae and with PMK1 gene (involved in appressoria formation) in Magnaporthe grisea. In order to study the function of this MAPK in H. annosum, we performed a complementation experiment in the S. cerevisiae fus3?? mutant. Expression level profiles, proteomics and immunology studies were used to distinguish between phosphorylated/active and non-phosphorylated/inactive form of the MAPK. Some valuable insights on this kinase cascade in Heterobasidion were discovered, but further studies are required to fully understand its role in the lifecycle of this fungus.
  • Gehrmann, Friederike (2013)
    Plant pathology is an important area of research for maintaining food security and ecosystem services. Many model systems have been developed to study plant diseases in a more practical environment such as in Arabidopsis thaliana. However, among the ten most important pathogens for research or economy, dimorphic plantassociated yeasts and pathogens of trees are missing. Plants are constantly challenged with a huge number of potential pathogens but the development of disease remains the exception. This complete resistance against a pathogen is termed non-host resistance. Some yeasts are capable to induce resistance in plants against other pathogens. This has potential for biological control measures. Our aim was to develop a model system for studying non-host and induced resistance with the dimorphic birch pathogen Taphrina betulina in Arabidopsis. We studied the mechanistic details conferring non-host resistance to T. betulina by challenging stress signalling mutants with the pathogen and observing symptom development, root growth, fungal establishment in planta and phototoxic stress. The results suggest that type I non-host resistance protects Arabidopsis against Taphrina. This is dependent on the EIN2 protein and mediated through an antagonism between the salicylic acid and jasmonic acid defence signalling pathways. Pre-inoculation with Taphrina betulina surprisingly increased growth of Pseudomonas syringae. We suggest that this is due to the activation of jasmonic acid and ethylene signalling which antagonise the salicylic acid defences required for Pseudomonas resistance. In this study, we showed that Arabidopsis is a non-host for Taphrina betulina and that this pathosystem can be used as a model for studying the mechanisms of nonhost resistance. These insights can give information about possible properties leading to susceptibility in the host. There is a large scope of opportunities for further study into this model.