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Browsing by discipline "Plant Biology"

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  • Lyu, Munan (2019)
    With the aggravation of global environmental problems and the reduction of finite reserved fossil fuels, seeking for alternative energy sources has become one of the priorities for the sustainable development of human society. Vascular plants save the biomass mainly as the form of xylem (also called as wood), which is now considered as an ideal environmental-friendly energy resource. Wood is now being used as renewable biofuels, Biomass composites to replace plastic and so on. The lateral meristem vascular cambium gives rise to xylem and phloem, contributes to the radial growth of plants. Dr. Mähönen’s group choose Arabidopsis root as a model to understand the growth dynamics of vascular cambium. Auxin is essential for various plant developmental processes. The transcription factor family AUXIN RESPONSE FACTOR (ARF) is an important component in auxin signaling pathway, among which AUXIN RESPONSE FACTOR5 (ARF5)/MONOPTEROS (MP) has been discovered to be essential in various plant developmental processes. The first part of my thesis work mainly focuses on analyzing the expression of ARFs during Arabidopsis root secondary development by using both histological reporter GUS and green fluorescent protein GFP. The second part is screening the secondary growth phenotype among the arf knock out mutants. As mp mutant fails to form primary root, artificial microRNA technique is applied to inhibit MP expression in transcriptional level, this construct was established in an XVE inducible system and driven by a broadly expressed promoter to specifically inhibit MP expression at the secondary development stage. I overexpressed amiMP in both wild type background and arf7,19 double mutant background. These three ARFs have strong expressions in cambium and they might function redundantly to regulate cambium activity. Our preliminary results suggest that ARFs function redundantly in regulating root secondary growth, ARF1 and ARF2 together are functional in regulating vascular pattern formation, and ARF16 can repress the root secondary growth and secondary xylem formation. MP is proved to regulate cambium activity and secondary xylem formation by controlling various auxin-response genes, ARF7 and ARF19 might also participate in this process.
  • Sjöblom, Robin (2020)
    In winter plants are exposed to harsh winter conditions with low temperatures being one of the major challenging factors. Traditionally winter has been considered a period unfavourable for plant growth and activity, but newer findings reveal higher levels of activity than previously assumed possible. Adaptations to different winter conditions are observed between species but also within species between populations which can be expressed in differing phenology between populations. Dormancy is a widespread phenomenon in the plant kingdom with major importance in plant evolution. Dormancy is considered to be present in seeds and buds of a wide spectre of plant groups, but asexual reproductive units like bulbils have been thought to lack the ability to undergo the phenomenon of dormancy. Findings suggest that a dormancy-like phenomenon can also be present in bulbils. Allium oleraceum is a bulb forming geophyte with a widespread distribution in Europe that grows on many differing habitats. The predominate form of reproduction in the species is the vegetative formation of bulbils. The wide distribution has led to adaptation to different environmental conditions, furthermore the species displays six levels of polyploidi partially differing in traits like ecology. The differences between cytotypes are regional and there are large intracytotytpic variations. In Finland tetra- and pentaploid populations have been reported, differing in their distribution patterns. The Finnish cytotypes exhibit differences in morphology but there is also evidence for ecological differences between the cytotypes. In addition, there is an atypical tetraploid population which differ significantly morphologically from other tetraploid populations. The objective of this master’s project was to examine the growth of bulbils from three different origins of Allium oleraceum. Another objective of the experiment was to give information on differences between the cytotypes in Finland, tetra- and pentaploids, but also the atypical tetraploid cytotype. Furthermore, I investigated whether the bulbils exhibit a dormancy-like phenomenon, with a special focal point on dormancy according to Vegis’ theory (1964). Earlier findings have shown considerable capability of growth during winter in Allium oleraceum, which is also examined in this project. The experiment included collected bulbils from two localities. Tetra- and pentaploid bulbils were collected from a mixed population of both cytotypes in Tvärminne, Hangö, and tetraploid bulbils were also collected from the atypical tetraploid population on Sveaborg, Helsingfors. Growth experiments were done outside and in growth chambers with controlled temperature and light conditions. The bulbils were planted outside in early autumn. Of each origin one group was kept outside during the entire winter, one group was put in growth chambers in December and one group was put in growth chambers in February to examine the effect of differing winter length on growth. During the experiment, the timing of growth onset in bulbs and leaf growth was followed up. The origins included in this project exhibited considerable differences. The pentaploid cytotype from Tvärminne had bulbils of greater size than the tetraploid cytotypes, between which there was only an indication of a difference. For the bulbils from the atypical tetraploid population growth onset took place early in the autumn and the vast majority of the bulbils started growing in a short period of time. For the two origins from Tvärminne the growth onset took place later and a considerable number of bulbils started growing in the spring. The tetraploid cytotype from Tvärminne exhibited earlier growth onset and a higher share of bulbils started growing in the autumn than the pentaploid cytotype from Tvärminne. In the growth chambers the differences between the three origins were not as obvious but the two cytotypes from Tvärminne were affected by the timing of the experiment more than the atypical tetraploid cytotype from Sveaborg. The observed differences between the origins in the experiment are thought reflect the different distribution patterns of the cytotypes and could hence be adaptations to different conditions. The atypical tetraploid population could be of Central European origin which would mean that it could have adaptations to mild winters which would explain the big difference between this origin and the two other origins. Between the two experiments in the growth chambers significant differences were observed. The growth was considerably greater in February than in December for all origins, especially in the midmost temperatures. The observed differences between the two experiments signifies that bulbils of Allium oleraceum exhibits a dormancy-like phenomenon and according to Vegis’ theory. In contrary to earlier findings, only little growth was observed during winter. The lack of considerable growth could be explained by the thick snow cover which made the amount of light that reached the plants very low which then led to little growth. The results from this project suggest that there are differences between the three different origins of bulbils included. Further studies are needed to find out if the observer differences are adaptations to local conditions or if there are differences on a higher level between the Finnish cytotypes.
  • Hällfors, Maria (2010)
    Vegetation maps and bioclimatic zone classifications communicate the vegetation of an area and are used to explain how the environment regulates the occurrence of plants on large scales. Many practises and methods for dividing the world's vegetation into smaller entities have been presented. Climatic parameters, floristic characteristics, or edaphic features have been relied upon as decisive factors, and plant species have been used as indicators for vegetation types or zones. Systems depicting vegetation patterns that mainly reflect climatic variation are termed 'bioclimatic' vegetation maps. Based on these it has been judged logical to deduce that plants moved between corresponding bioclimatic areas should thrive in the target location, whereas plants moved from a different zone should languish. This principle is routinely applied in forestry and horticulture but actual tests of the validity of bioclimatic maps in this sense seem scanty. In this study I tested the Finnish bioclimatic vegetation zone system (BZS). Relying on the plant collection of Helsinki University Botanic Garden's Kumpula collection, which according to the BZS is situated at the northern limit of the hemiboreal zone, I aimed to test how the plants' survival depends on their provenance. My expectation was that plants from the hemiboreal or southern boreal zones should do best in Kumpula, whereas plants from more southern and more northern zones should show progressively lower survival probabilities. I estimated probability of survival using collection database information of plant accessions of known wild origin grown in Kumpula since the mid 1990s, and logistic regression models. The total number of accessions I included in the analyses was 494. Because of problems with some accessions I chose to separately analyse a subset of the complete data, which included 379 accessions. I also analysed different growth forms separately in order to identify differences in probability of survival due to different life strategies. In most analyses accessions of temperate and hemiarctic origin showed lower survival probability than those originating from any of the boreal subzones, which among them exhibited rather evenly high probabilities. Exceptionally mild and wet winters during the study period may have killed off hemiarctic plants. Some winters may have been too harsh for temperate accessions. Trees behaved differently: they showed an almost steadily increasing survival probability from temperate to northern boreal origins. Various factors that could not be controlled for may have affected the results, some of which were difficult to interpret. This was the case in particular with herbs, for which the reliability of the analysis suffered because of difficulties in managing their curatorial data. In all, the results gave some support to the BZS, and especially its hierarchical zonation. However, I question the validity of the formulation of the hypothesis I tested since it may not be entirely justified by the BZS, which was designed for intercontinental comparison of vegetation zones, but not specifically for transcontinental provenance trials. I conclude that botanic gardens should pay due attention to information management and curational practices to ensure the widest possible applicability of their plant collections.