Browsing by Subject "Atlantic salmon"
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(2023)Three-dimensional (3D) cellular cultures have been shown to represent tissue formations and functions more accurately than two-dimensional (2D) cultures and have been successfully utilized more accurately in model organisms, e.g., to understand cellular modular functions. However, the applications in non-model organisms are limited, and to our knowledge have not been implemented in ectotherms. At an ecological scale, the technique can enhance our understanding by providing insights on cellular and tissue level molecular mechanisms. A potential implementation of this method in Atlantic salmon is to elucidate the molecular function of the vestigial-like 3 (vgll3) gene, which plays a central role in salmonid maturity, potentially by regulating energy allocation via regulating adipogenesis. In this thesis, a proof of principle study was implemented, where the feasibility of obtaining and maintaining a suspension 3D adipose tissue culture in Atlantic salmon (Salmo salar) was assessed. The harvested visceral white adipose tissue from around the intestinal tissue of mature Atlantic salmon (salmon past smolt stage) was first separated into stromal vascular fraction (SVFs) and mature adipose fraction (MAFs). SVFs contain preadipocytes (precursors of adipocyte cells) in addition to a variety of other cell types. MAFs are mature adipocytes. Both MAFs and SVFs were successfully maintained in-vitro for over four weeks. SVFs were then successfully differentiated into mature adipocytes, demonstrating the feasibility of studying adipogenesis in Atlantic salmon. Proof of this methodology and its further implications may help us to understand the cellular functions of vgll3 and may subsequently help to better understand its causal relation to the maturation process in Atlantic salmon.
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(2020)There is a naturally reproducing Atlantic salmon population in the River Teno in northern Norway and Finland. The Teno population has a strong population structure and up to 28 subpopulations have been recognized. Estimation of effective population size is important in conservation of the subpopulations. Effective population size tells about genetic variation of a population and is among the most important concepts in conservation genetics. In this study, current and past effective population sizes of 28 subpopulations were estimated from high density SNP-data for 1137 individuals in total. The estimation was done with the linkage disequilibrium method and the effects of using different assumptions were studied. Current estimated effective population sizes in subpopulations were generally low and ranged from around nine to 272 individuals. Only four populations had a current effective population size bigger than 50 individuals. Past effective population sizes showed a clear declining trend from the most distant generations in all populations. The choice between physical and linkage map as well as female, male or average linkage map had an effect to estimates. Also, different sample size corrections resulted in different estimates. Furthermore, effective population size was estimated with temporal method in three populations. It was detected that the estimates from temporal and linkage disequilibrium method were different from each other. The results of this study suggest that Teno Atlantic salmon subpopulations have declined over the past 150 generations and are in risk of losing genetic variation due to current low effective population size. This should be taken into account in conservation plans.
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(2022)Life-history decisions, and trade-offs, are affected by resource acquisition, which can vary among individuals, and during the life cycle of an individual. In Atlantic salmon (Salmo salar) many life-history decisions, such as age-of-maturity, are strongly associated with two genomic regions, vgll3 and six6. Previously, these genomic regions have been associated with food acquisition in adult sea-run Atlantic salmon; however, this has not yet been studied in juvenile salmon. Furthermore, population density strongly affects the food availability of juvenile salmon through resource competition. Here, using controlled crosses reared in semi-natural stream conditions, I investigated the effect and relationship of life-history genetics and population density on juvenile Atlantic salmon food acquisition. Stomach contents from 148 juvenile Atlantic salmon were quantified for their prey item composition, total number of prey items and dry weight, and environmental and genetic basis of food acquisition were analysed using mixed effects models. Late maturing six6 genotype fish had higher stomach-content dry weights and fuller stomachs than early maturing individuals, in low densities. Furthermore, low density fish were of better condition and had higher growth rates than high density fish. There was no association between six6 and vgll3 genotypes and food acquisition in high densities. The results support the existing knowledge of the negative effect of increasing population density on juvenile Atlantic salmon growth and condition. Furthermore, the density dependent association of six6 and food acquisition suggest a trade-off between early maturation and maximised food acquisition.
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(2021)In teleost fish, various egg traits play a crucial role in the development, growth, and survival of the offspring and thus affect maternal reproductive success. Atlantic salmon (Salmo salar) is a species where age at maturity, an important life-history trait influencing reproductive success, is under environmental and genetic control. In this study, I assessed how genetics of the vgll3 genotype and the dietary energy content affect egg traits and female maturation rate. The fish used in this study were lab-bred, three-year- old female Atlantic salmon with different vgll3 genotypes fed on one of two diets differing in energy content. The eggs traits included in the study were egg size, lipid, and protein content. Female maturation rate was not affected by the energy level of the diet or the vgll3 genotype. Egg size expressed as egg dry weight differed between females in the two feed treatments. These differences may be attributed to the increased lipid content of the eggs due to the higher fat content of the maternal diet. Females receiving high energy feed had a significantly higher egg lipid content compared to the low energy feed treatment. Females homozygous for the vgll3 allele associated with early maturity had a significantly lower egg lipid content in comparison to the females homozygous for the vgll3 late maturity allele indicating a potential reproductive fitness cost associated with early maturity. No effect of diet or vgll3 was found in egg protein content. This study provides the first evidence of vgll3 not only affecting Atlantic salmon age at maturity, as found in previous studies, but also egg lipids through maternal provisioning of nutrients.
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