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  • Karvonen, Reena (2021)
    Pohjoisilla soilla on suuri merkitys globaaleissa biogeokemiallisissa kierroissa niiden kerrostaman ja vapauttaman hiilen vaikutuksesta. Ilmastollisten tekijöiden on todettu olevan yhteydessä suon hydrologisiin vaihteluihin, kuten kuivumiseen, vettymiseen, routaantumiseen tai roudan sulamiseen. Muutokset suon hydrologiassa ovat menneisyydessä heijastuneet vuorovaikutteisesti soiden kasvillisuuteen ja niiden rooliin maailmanlaajuisesti merkittävinä hiilinieluina. Pohjoisten ikiroutasoiden ainutlaatuinen ja rikas habitaatti on vaarantunut nykyisen ilmaston lämpenemisen myötä. Maisterintutkielmani tavoitteena on arvioida mahdollisia ilmaston lämpenemisen aiheuttamia vaikutuksia pohjoisiin soihin tutkimalla viimeisten vuosisatojen aikana tapahtuneita muutoksia suokasvillisuudessa. Tutkielmassa selvitin, miten tutkimussuoni kasvillisuus on muuttunut ja millaisia yhteyksiä voidaan havaita eri ilmastovaiheiden merkittävimpiin lämpötilan muutoksiin. Keskityin analysoimaan näitä muutoksia kasvimakrofossiili-analyysin avulla. Näytesarjat ajoitettiin radiometrisin menetelmin. Tulokset osoittivat tutkimussuon käyneen läpi kuivan kasvillisuuden vaiheita sekä ilmastohistorian lämpiminä että kylminä ajanjaksoina. Nykypäivän lämpenemisen aikana eri näytepisteissä on tapahtunut sekä kuivumista että siirtymiä kosteaan suoekosysteemiin ikiroudan sulamisen jälkeisinä ajanjaksoina. Tutkimukseni tulokset auttavat osaltaan ymmärtämään ympäristössä ja ilmastossa tapahtuvien muutosten kompleksista vaikutusta pohjoisiin suoekosysteemeihin. Tutkimuksen perusteella voidaan arvioida nykyisen ilmastonmuutoksen mahdollisia vaikutuksia tutkimussuohon, sekä rinnan muiden tutkimusten kanssa yhteyksiä pohjoisten soiden tulevaisuuden hiilitasapainoon ja suuren mittakaavan biogeokemiallisiin kiertoihin.
  • Kivistö, Ilkka (2018)
    Lepakot ovat suuri, monimuotoinen ja ekologisesti merkittävä nisäkäslahko. Viime vuosikymmenien aikana ne ovat paljastuneet myös merkittävien zoonottisten taudinaiheuttajien kantajiksi. Suomessa esiintyy kolmetoista lepakkolajia, joista suurin osa esiintyy täällä levinneisyysalueensa pohjoislaidalla ja joiden kantamista taudinaiheuttajista on tehty vielä hyvin vähän tutkimuksia. Tutkielmassani selvitän korona- ja paramyksovirusten esiintymistä eteläisen Suomen lepakoilla vuosina 2013-2016. Lisäksi pyrin kerätyn aineiston perusteella selvittämään, onko näytteitä luovuttaneiden lepakoiden iällä, näytteiden keruukuukaudella tai näytteiden keruualueella vaikutusta löydettyjen virusten esiintyvyyteen. Aineistona käytettiin muiden tutkimusprojektien yhteydessä lepakoilta kerättyjä uloste- ja anaalipyyhkäisynäytteitä sekä lepakoiden päivehtimispaikoilta kerättyjä ulostenäytteitä. Näytteistä eristettiin RNA ja ne seulottiin koronaviruksia ja paramyksoviruksia tunnistavilla ja optimoiduilla kvantitatiivisilla käänteistranskriptio- PCR-menetelmillä (RT-qPCR) ja löydökset varmistettiin tavallisilla käänteistranskriptio-PCR-menetelmillä (RT-PCR). Jälkimmäisistä reaktioista saadut tuotteet myös sekvensoitiin. Ulostenäytteiden seulonnan tuloksista kertyneestä aineistosta tehtiin tilastolliset analyysit yleistetyillä lineaarisilla sekamalleilla, joissa vastemuuttujana käytettiin viruksen esiintymistä ja mallin muuttujina näytteen luovuttaneen lepakon ikäryhmää ja lajia, näytteen keräyskuukautta ja eliömaakuntaa, josta näyte oli kerätty. Mallien satunnaistekijöinä käytettiin näytteiden keräyskuntaa tai näytteiden keräysvuotta. Sekvenssiaineistosta tehtiin fylogeneettiset analyysit käyttäen suurimman todennäköisyyden (Maximum Likelihood) menetelmää ja Bayesilaista menetelmää, joiden tuloksina saatiin kaksi fylogeneettista puuta. Neljän vuoden aineistosta todettiin yhteensä 18 lepakkoyksilöä, jotka kantoivat koronaviruksia, mutta paramyksoviruksia ei aineistosta löydetty. Tilastolliseen tarkasteluun hyväksyttiin 77 ulostenäytettä, joista 13 oli positiivisia koronaviruksille. Anaalipyyhkäisynäytteistä kerättiin 38 kappaletta ja näistä 5 oli positiivisia koronaviruksille. Päivehtimispaikoilta kerättyjä ulostenäytteitä tutkittiin 28 kappaleitta ja näistä 4 oli koronaviruspositiivisia. Koronaviruksia löydettiin Varsinais-Suomen, Uudenmaan, Etelä-Pohjanmaan ja Pohjois-Savon eliömaantieteellisiltä alueilta. Uloste- ja anaalipyyhkäisynäytteiden perusteella koronaviruksia esiintyy Suomessa pohjanlepakoilla, isoviiksisiipoilla, vesisiipoilla ja viiksisiipoilla. Tutkielmassa esitellään ensimmäinen pohjanlepakon beetakoronaviruslöytö. Tämä virus ryhmittyy fylogeneettisissa puissa samaan haaraan muiden saman lepakkosuvun kantamien beetakoronavirusten kanssa ja on samalla melko läheistä sukua MERS-koronavirukselle. Tutkielmassa esitellään myös ensimmäinen isoviiksisiipan koronaviruslöytö, joka fylogeneettisten analyysien perusteella ryhmittyy samaan fylogeneettisen puun haaraan luxemburgilaisen ruskosiipan alfakoronaviruksen kanssa. Eniten koronaviruksia löydettiin vesisiipoilta, jotka suurimmalta osin ryhmittyivät samaan fylogeneettisen puun haaraan. Merenkurkussa sijaitsevasta Mustasaaren kunnasta kerätystä vesisiipan ulostenäytteestä löydetty sekvenssi kuitenkin sijoittui erilleen muista suomalaisista sekvensseistä ja eteläisestä Euroopasta todettujen sekvenssien joukkoon, mikä voi viitata tämän alueen lepakkopopulaation ja sen kantamien virusten levinneen Suomeen läntistä reittiä. Tutkielman tulokset luovat hyvän pohjan jatkotutkimuksille, joissa voidaan selvittää virusten tarkempaa esiintyvyyttä sekä niiden tarkempia ominaisuuksia.
  • Lemoine, Gabriela (2024)
    Lichens are symbioses between fungi, photosynthetic algae and other organisms. The fact that several different fungi may occur in the same lichen thallus adds a further dimension to the diversity of these miniature ecosystems. Calicioids are a polyphyletic group of predominantly lichenised fungi which includes many species with stalked ascomata, topped with a persistent spore mass (mazaedium). One such species is Chaenotheca chrysocephala, a relatively common crustose lichen with a wide distribution. The lichenicolous fungus Chaenothecopsis consociata grows on the thallus of C. chrysocephala and is generally considered to be a parasite. This study aims to map the temporal and geographical distribution of C. chrysocephala and C. consociata in Europe in order to find out whether the parasite was present there before the year 1942, when the species was described, and to identify possible patterns which may affect the population dynamics of these two species. This study found that C. consociata was indeed present in Europe before 1942, at least in Norway, Sweden and Finland. Additionally, the percentage of infected C. chrysocephala thalli seems to have increased in Europe since the parasite was first found. The GBIF dataset showed a significant increase in infected C. chrysocephala thalli in northern Europe (N-EU) compared to central-southern Europe (CS-EU). Although the exact reason is unclear, this increase may be related to differences in forest structure across Europe. Firstly, the host lichen seems to prefer Picea and Pinus as its substrate, these being typical trees of needleleaf forests in Europe. Furthermore, the decrease of old-growth forest stands in Sweden and Finland may have reduced suitable habitat for the host, while the concurrent increase of disturbed stands may have favoured the dispersal of the parasite.
  • Huovinen, Lena (2021)
    Lake ecosystems are shaped by water chemistry processes that affect the lake environment and the species communities within. Changes in the water chemistry thus have far-reaching consequences. Water colour is one variable that affects water chemistry and stems from humic substances in the water. Dark water reduces light availability and also affects nutrient and oxygen availability. A trend of brownification of freshwater systems has been observed in recent years and it is expected to influence species community’s diversity and composition. The aim of this thesis was to study whether brownification is an ongoing issue in the study lakes and whether it has had a negative effect on phytoplankton diversity and resulted in shifts in the phytoplankton composition. A data set including about a 100 lakes in Finland with measurements from 1965 up until now served as the study system which was analysed with statistical methods. The results indicated a brownification trend in the past decades. The brownification so far had a positive impact on species richness but a negative impact on beta diversity. Brownification also affected species composition. Flagellates and autotrophic species increased in darker waters but mixotrophic species that are known to dominate in dark water colour, did not show a clear increase with water colour. Other hydrological variables than water colour could have had a bigger impact on the phytoplankton community than water colour but future monitoring of the phytoplankton community is recommended to see if water colour will have a negative impact on species diversity in the future.
  • Välkki, Anna (2021)
    Birdsong is information, communication and a target of sexual selection. Song complexity is the variation in bird song structure. Within-song complexity is variation in song components, in number and order of syllables and phrases. Song complexity is an honest trait under sexual selection and competition for mates increases it. When species expands its range front to a new area, the population density is low in the beginning. Males in the new population do not need to compete as hard as before, because population density is decreased, which decreases song complexity. Many warblers have complex songs and they do not have a colourful plumage. It is well possible that song complexity is the main target of sexual selection in warblers. The purpose of this study was to investigate if there were differences in song complexity in Eurasian reed warblers (Acrocephalus scirpaceus) breeding at their range front in Finland. The population of Finland is 100 years old and the population density is still decreased in compared to Central Europe. My hypothesis was that reed warblers would sing less complex songs at lower densities as competition for mates is low. I used song recordings of 51 reed warbler males, which I recorded during the breeding season 2019 in song complexity analyses. Recordings were from South Finland from 14 locations in 6 municipalities. Most of the recording places were coastal reedbeds. A couple of recording places were reedbeds in inland ponds and reedbeds in a flooded forest. I counted the male densities within 50 m and 200 m radius around the recorded males using Google Maps. I took account the males which were at least 20 m away from each other and were there in the same week than the recorded male. I extracted four within-song complexity variables from the recordings: Total number of syllables, number of syllable types, number of syllable transitions and mean frequency bandwidth. I measured song complexity with spectral analyses using Koe, a bioacoustic software. I did next analyses with R to see if there is association between local density and complexity. I found that one of the song complexity variables, total number of syllables, was significantly positively associated with the density of singing males within 200 m radius. The other variables were not significantly associated with male density, but number of syllable types and number of syllable transitions showed a similar relationship with singing male density within 200 m. Previous studies support the hypothesis that higher local density can increase some aspects of song complexity, for example number of syllables or length of phrases. Some males did not have neighbours within 50 m. Density within 50 m had no significant relationship with song complexity variables. However, mean frequency bandwidth, total number of syllables and number of syllable types showed more variation when neighbours were present, which suggest that males increase their effort when they have competition. Finally, I found that the number of syllable transitions decreased as the breeding season progressed. This could be explained with younger birds coming to breed later or with paired males singing less.
  • Aalto, Ida-Maria (2021)
    The general structure of the vertebrate brain is highly conserved. However, a large amount of variation exists in brain size and shape, both regarding the whole brain and its subdivisions. This variation is caused by selection acting on species’ behavioural traits and shaping the evolution of the brain in the same process. It is known that one of the factors affecting vertebrate brain morphology is ecology, including habitat complexity, activity patterns and diet. The effects of diet on brain size have been studied in primates, bats and small mammals, where frugivory in primates and bats and insectivory in small mammals, are linked to larger brains. The effect of diet on brain morphology has not been studied in squamate reptiles (lizards and snakes) and the ecological factors behind size and shape variation are largely unknown in squamates compared to other vertebrates. Squamates show large diversity in diet preference as well as feeding behaviour in general, which makes them a suitable model organism to study brain evolution. Further, squamates have highly developed nasal chemical senses that are important for feeding behaviour. These factors in mind, it would be expected that diet has an effect on squamate brain morphology, and especially the brain regions important for feeding behaviour, such as the olfactory bulbs in the forebrain. To study the effects of diet on squamate brain size and shape, the brains of 51 squamate species were micro-CT scanned and 3D-brain surfaces were generated for each species. The species were categorized into four diet groups: carnivorous, herbivorous, omnivorous and insectivorous. To analyse shape and size change across species and diet groups, 73 landmarks were placed on each 3D-brain surface, covering all brain regions: olfactory bulbs, cerebral hemispheres, telencephalon, diencephalon, midbrain, cerebellum and hindbrain. The results from this study show that diet affects significantly the shape of the whole squamate brain, as well as the size of the telencephalon. Telencephalon size differed significantly between the herbivorous and carnivorous groups. Diet had no significant effect on the other brain subdivisions studied here, including the olfactory bulbs. Diet is a large part of a species’ ecology and it is very complex behaviour involving several senses and brain regions, which could explain the results obtained from this study. The results from this study are preliminary, but they indicate that diet could be one of the factors affecting brain morphology in squamates. In the future, including other factors of feeding behaviour than food choice and analysing the effects of diet on a deeper level, such as including brain regions within the brain and analysing cellular organization, could shed some new light on how diet affects squamate brain morphology.
  • Isotalo, Teija (2020)
    Anthropogenic activity has enhanced global warming at alarming rates, causing temperatures to increase and heat waves to occur more frequently. The effects of global warming are prominent in aquatic ecosystems, particularly in the Baltic Sea. Temperature increases and fluctuations in the Baltic Sea create a changing environment and this can affect inhabiting species’ behaviors, specifically behaviors during reproduction. Reproductive behavior influences both the number and quality of offspring born into a population therefore making behavior changes during reproduction important to study. The three-spined stickleback (Gasterosteus aculeatus), an ectothermic animal, inhabits the Baltic Sea and is an ideal species to study reproductive behavioral changes. Although previous studies have researched three-spined sticklebacks in changing environments, none had specifically looked into the effects of rising temperatures and temperature fluctuations on male three-spined stickleback reproductive behavior. The three-spined stickleback is of particular interest because it reproduces in shallow waters which tend to be more affected by temperature changes. In this study, I aimed to investigate behavioral responses of stickleback males to higher temperatures and to temperature fluctuations during reproduction, as well as the consequences the responses have for reproductive success and the viability of offspring. In order to see how this species would cope with rising temperatures and heat waves during reproduction, a comparative climate chamber experiment was executed in Southern Finland at Tvärminne Zoological Station. Males were housed in either 19°C or 14°C for two breeding cycles, and for the second breeding cycle eight males switched temperatures to experience a temperature fluctuation. Results show that during reproduction, three-spined sticklebacks respond to higher temperatures with increased courtship activity, increased parental activity, quicker breeding cycles, and more weight lost. Parental care activity in constant high temperature decreases from the first to the second breeding cycle, while parental activity in constant low temperature increases. During temperature fluctuations, males experiencing a rise in temperature increase their parental care activity, while males experiencing a drop in temperature demonstrate the opposite. However, no significant consequences of temperature and temperature changes for reproductive success and the viability of offspring were detected during the two breeding cycles. Overall, the results of this study would indicate that the three-spined stickleback will prove to be a resilient species, and maintain population growth in the face of increased temperatures and temperature fluctuations in the Baltic Sea.
  • Kotilainen, Aino Kaarina (2023)
    Climate change poses an ever-increasing threat on biodiversity as the global mean temperature rises causing changes in weather patterns. Species will have to adapt to the circumstances or follow their climatic niches across space to avoid decline and extinction. Many species are already threatened by extinction due to climate change. Understanding how species are reacting to rising temperatures can help us preserve biodiversity. Genetic adaptation is a long process and takes several generations to occur. A more immediate means to cope with variation is adjusting through phenotypic plasticity, which can help species cope with environmental changes in the short-term. Plasticity can help individuals maintain fitness in different environments and with fluctuating environmental conditions. Flowering phenology is a plastic trait which can have a large impact on reproductive success. Flowering is an important part of a plant’s life cycle as it can produce offspring with new combinations of genes. In this thesis I examine how temperature affects the flowering phenology of Hypericum species and how this thermal plasticity affects fitness. Populations of Hypericum perforatum, H. maculatum and H. montanum from different parts of their distribution across Europe were studied in greenhouse experiments. The plants were grown in four different temperature treatments (16/6°C, 20/10°C, 24/14°C, 28/20°C) and the timing of first flowering was monitored. Seed mass and flower count were recorded and used as measures of fitness. In general, the plants flowered later in the colder temperature treatments. The results differed between species: in H. maculatum the leading-edge populations were less plastic while in H. perforatum differences between areas were negligible. More plastic accessions produced more flowers due to earlier flowering. There was no effect on seed mass. The possible effects of plasticity on overall fitness highlight the need for detailed information on plasticity for predicting species response to climate change.
  • Nygård, Elisa (2020)
    Global surface temperature is increasing at an alarming rate. Local populations can cope with the change, if they have adaptive potential to face the new thermal regime. Hybridization with a closely related lineage is one potential source of adaptive genetic variability. My thesis aimed to investigate thermal adaptation by looking into thermal tolerance differences between two mound-building wood ants Formica polyctena and Formica aquilonia and their hybrids. The two parental species have distinct distributions: F. aquilonia can be found in Northern Europe while F. polyctena is distributed from Central Europe to Fennoscandia. The samples for this thesis were collected from a relatively small area in southern Finland and Åland Islands. Aim of my thesis was to clarify whether the two parental species have distinct thermal tolerances, which would reflect the differences in their distributions. I also tested whether hybrid individuals have wider thermal limits since they have alleles from both northern and southern parental species and could therefore show adaptive potential. I tested thermal tolerance differences with two temperature assays: heat-knockdown resistance and chill-coma recovery. I hypothesized that F. aquilonia would express more cold-tolerant thermal limits whereas F. polyctena would express more heat-tolerant limits. My results showed that the parental species differed in their thermal tolerance and expressed thermal limits which reflected their distribution. These results support the thermal adaptation hypothesis: parental species expressed thermal limits that reflected the thermal environment in their native habitat. The results also showed that hybrids could not combine the thermal tolerance of both parental species as they did not have wider thermal tolerance than parental species. Intriguingly, dry weight had a significant role in thermal tolerance, bigger ants coping better with higher temperatures. These results contribute to building up knowledge on the outcomes of hybridization and the potential that species possess in coping with the environmental change. Wood ants are keystone species in boreal forests and the findings of my thesis shed a light on the changes in population dynamics for these species in the face of global climate change.
  • Burg, Skylar (2021)
    In this study, a greenhouse experiment was used to assess if temperature sensitivity, specifically, thermoregulatory plasticity, has a functional role in floral reflectance and pigmentation in a population of P. lanceolata grown in three different temperature treatments, reflecting past, present, and future summer temperatures. Spectrophotometry, surface temperature readings, and near-infrared (NIR) region image analysis were used to identify how the spectral absorbance properties and biochemical makeup of P. lanceolata flowers differed between treatments. Reflectance and phenolic absorbance were both found to be influenced by ambient temperature. However, surface temperature of flower spikes was not affected by growing temperature, reflectance, or phenolic absorbance. The results suggest that Plantago lanceolata may utilize thermoregulatory plasticity in reflectance and phenolic absorbance to adjust to rising temperatures. These findings have important implications in species reactions to climate change and denotes that increased selection on thermal function traits may occur under a future climate scenario of continued warming in temperate and boreal biomes.
  • Ordax Sommer, Nicolás (2021)
    Trace element analysis is a useful tool for the study of migration and migratory connectivity in birds. Trace elements are present in the environment and, through the food chain, can be incorporated into tissues such as growing feathers. Since the concentrations of elements remain stable after the feather has stopped growing, and trace element abundances can vary at very small geographical scales, the concentration of trace elements in feathers can provide information on the location where a feather was moulted. Trace element analysis is still rarely used and there are important gaps in our understanding of how trace elements can vary at different organizational levels such as within a feather, between individuals or even between species. It is also not clear if large-scale geographical patterns can be detected by the method, as trace element concentrations can vary a lot even at small scales, which could make it impossible to see larger-scale patterns. To address that, my objectives were (1) analysing the variability of trace element concentrations within feathers, between individuals and between species and (2) determining whether trace element levels differed in feathers grown in Africa compared to feathers grown in Europe. This would shed insight on the suitability of trace element analysis for the study of migration and migratory connectivity. I analysed the concentration of 18 trace elements in the rachis of feathers from willow warblers (Phylloscopus trochilus) and barn swallows (Hirundo rustica) collected in Finland. I plucked three belly feathers from willow warblers collected in spring, whose feathers had grown in Africa. These feathers were used to analyse variability of trace element concentrations within feathers and between individuals. They were also compared to feathers plucked from barn swallows collected in spring (two feathers per bird) to analyse variability between the feathers of two species that winter in the same region. Finally, African-grown feathers of willow warblers were compared to European-grown feathers of willow warblers collected in autumn (two feathers per bird) to look for differences in trace element concentrations in feathers grown on two different continents. Trace element concentrations were analysed using Laser-Ablation Inductively-Coupled-Plasma Mass-Spectrometry (LA-ICP-MS), which allowed to measure concentration at hundreds to thousands of points along the feather rachis. The concentration of each of the 18 elements was used as the response variable in linear mixed models (LMM). To model variation in concentration within the feather I used location along the feather rachis as the explanatory variable and explored how well it predicted concentration of each element. To compare variation between feathers and individuals I fit models including and excluding the feather and individual that each measurement belonged to as random effects and compared them using AIC. To compare between willow warbler and barn swallow feathers grown in Africa I included species identity as the explanatory variable and looked at how the concentration of the 18 elements differed between them. Finally, I followed the same approach to compare willow warbler feathers moulted in Africa and in Europe. For most elements there was little variation along the feather rachis, with concentration remaining stable from feather base to tip. Zn and S showed an increase in concentration starting at the feather base until the central part of the feather and then remained constant toward the tip. Feathers belonging to the same individual showed mostly similar trace element concentrations, although there were exceptions and differences between feathers of different willow warbler individuals were also little. 10 out of 18 elements showed significant differences in feathers of willow warblers and barn swallows grown in Africa. Eight of those elements were more abundant in willow warbler feathers, while only two were more abundant in barn swallow feathers.12 out of 18 elements showed significant differences between their level in African-grown feathers and European-grown feathers. Of those, 10 elements showed higher levels in African-grown feathers, while only two were higher in European-grown feathers. My results suggest that trace elements can show variation at different organizational levels. Variability within feathers was important in at least two elements, which could be caused by physiological processes. This means that when designing sample collection for trace element analysis, unless we know that an element does not vary along a feather, it is important to consider which part of feathers we are sampling. Variability between feathers and individuals was lower than within feather variability, but still significant. Future studies should account for possible within and between individual differences in their design. Differences between barn swallows and willow warblers were large, which was expected based on the literature. It is still unknown what drives these differences between species: some explanations suggested have been physiological and dietary differences or differences in their habitats. I also found clear differences between feathers of willow warblers grown in Europe and Africa. While the exact cause is still not known, this means that at least in willow warbler feathers it is possible to study large scale geographical patterns by trace element analysis. LA-ICP-MS has potential to be a powerful tool to study migration and migratory connectivity in birds. It allows to detect variation in trace elements at continental scales while also allowing to control for different levels of variability in the study design. I encourage researchers to adopt its use in their research.
  • Williamson, Adam (2024)
    For a better understanding of global climate change we need evidence allowing us to track changes in the environment. Pollen is geologically stable, making it a key option as a potential proxy for tracing historic environmental changes. To quantify past environmental changes, it is necessary to test proxies under today’s climate. The amount of UV-B radiation reaching the surface of the Earth has varied throughout the Earth’s history. These variations are ecologically important because changes in UV-B radiation impact plant regulation, growth, defense, and decomposition. The availability of fossil pollen and spores has resulted in significant interest in the potential of using the relationship between UV-B radiation and the accumulation of phenolic sunscreens as a proxy to trace past changes in UV-B radiation. Fossil pollen from Pinus sylvestris is readily available and proven techniques exist to quantify levels of UV-B absorbing compounds from both fossil and extant pollen. We investigated how levels of UV-B-absorbing compounds in Pinus sylvestris pollen change after strobili developed under UV attenuating filters. Fifteen Pinus sylvestris trees were selected from a seed orchard of trees in Nurmijärvi, Finland. The treatments used were Rosco 226 film – filtering solar UV-A and UV-B light, polyester film – filtering solar UV-B, polyethylene film – acting as a transparent control, and an open control condition with no filter. The filters were installed in April 2022 and 2023 and remained in place each year beyond dehiscence towards the end of May. The pollen was analysed using Fourier-transform infrared spectroscopy. Principal component analyses and linear regression models were used to simplify the multivariate data and then describe the levels of UV-B absorbing compounds in the different treatment groups. A sample of needles from underneath the filters was used to verify the effectiveness of UV treatments across the experimental design by analysing their epidermal flavonol content. Our results found no clear link between UV-B exposure and accumulation of UV-B absorbing compounds in Pinus sylvestris pollen. However, we did find statistically significant differences in concentrations of UV-B absorbing compounds in pollen between the different trees. The needle analyses verified that the experimental design had the potential to affect the biochemistry of these branches by revealing significant differences in relative absorbance by epidermal flavonols due to UV treatment type. Multifactorial drivers affect the concentrations of UV-B-absorbing compounds in plants, and viewing the response of these compounds to a single driver may be an oversimplification complicating their use as a proxy. We argue that methodologies used in previous research have inconsistencies which fail to account for environmental factors that either covary with UV radiation or diverge from it. This may explain why our results go against the trend. Finally, we examine our own research experimental design and suggest improvements and avenues by which this research can move forward.
  • Mulà, Clelia (2021)
    Prey defend themselves from predators using a range of tactics, including evolving distasteful compounds and advertising their unprofitability with aposematic warning signals. Therefore, before attacking a potential prey, predators need to assess whether it is palatable and profitable to consume. Previous studies have demonstrated that predators can rely on personal experience (personal information) and/or observe the foraging behaviour of others (social information) to assess prey profitability. ‘Social avoidance learning’, where predators observe a negative foraging experience associated with beak wiping, has been suggested to be important to explain how novel warning signals evolve. However, in previous studies observers saw a very strong “disgust response” of the demonstrators, when in fact there is variation in how strongly birds respond to unpalatable food. Therefore, to understand how social avoidance learning can work in nature I investigated how blue tits (Cyanistes caeruleus) use social information from demonstrators that show a weaker response to unpalatable food. I provided social information to observers using video playback of a demonstrator bird consuming a novel conspicuous prey item and showing: (1) a strong disgust response (65-95 beak wipes) as in previous studies, (2) a weak disgust response (12-25 beak wipes), or (3) no disgust response (control, no beak wiping). Next, I investigated birds’ foraging choices using a miniature novel world protocol where birds encountered novel aposematic (conspicuous and unpalatable) and cryptic (camouflaged and palatable) prey. Tested individuals consumed fewer aposematic prey after seeing a strong response but seeing a weak response did not influence their foraging choices. My results, therefore, suggest that information about novel aposematic prey may be less likely to spread socially than previously thought. However, more work is needed to determine both the availability and salience of graded social information.
  • Serra Dominguez, Lluis (2021)
    Beta diversity (total dissimilarity) can be partitioned into two components: dissimilarity attributed to turnover and nestedness-resultant dissimilarity. Turnover refers to the variation in species identities among sites and implies the replacement of some species by others. In contrast, nestedness occurs when species-poor sites have a subset of the biota present in species-richer sites. Although disentangling the relative contribution of these two antithetic components from beta diversity can characterize species assemblages, the dissimilarity indices do not provide information on the processes generating the patterns. Conversely, Hierarchical Modelling of Species Communities (HMSC), which unifies many of the recent advantages of Joint Species Distribution Models, has proved to be the one of the best performing frameworks for unravelling the underlying mechanisms structuring ecological communities. The aim of this research is to explore the relationship between the outputs of the HMSC model and the dissimilarity indices in different communities with a wide range of parameterizations. As the observed patterns measured by the beta-diversity indices result from the underlying processes which HMSC attempts to capture, I hypothesized that both frameworks are at least partially linked to each other. To achieve this aim, I simulated the community data by following the structure of the HMSC model. For simplicity, only one environmental covariate was considered, which was scaled to 0 mean. The intercept of the HMSC model accounted for the baseline occurrence probability of the species, while the slope modeled the species responses to the environmental covariate. The HMSC-intercept and the HMSC-slope, which represent the species multivariate niches, were summarized in terms of center and spread. Simultaneously, the beta diversity indices (total, turnover and nestedness dissimilarity) were calculated from the community data. Finally, the outputs of both frameworks were related in terms of linear modelling and variation partitioning. As hypothesized, the results of this study suggest that outputs of the HMSC model are able to explain most of the variation in the beta-diversity indices, indicating that both frameworks are strongly related. By plotting the species niches (intercept and slope coefficients of the HMSC model) it is possible to determine the main axes of niche variation producing the nestedness and turnover patterns. While nestedness is generated by a shared response of the species to the environmental covariate(s), turnover is produced by variation in the species responses. Finally, the total dissimilarity index is driven by species rarity. In conclusion, the most comprehensive evaluation of the structure of ecological communities and the processes determining the diversity patterns can be achieved by combining the outputs of beta-diversity indices and the HMSC model.
  • Korhonen, Sanna (2024)
    Tutkielmassani kartoitan Ahvenanmaan hoikkatytönkorentopopulaation (Ischnura elegans) Wolbachia infektioita. Lisäksi pyrin selvittämään, löytyykö samaa infektiota korentoja loisivilta vesipunkeilta (Hydrachnidia). Wolbachia on niveljalkaisilla yleisesti esiintyvä endosymbioottinen bakteeri. Bakteerin yleinen esiintyminen johtuu sen kyvystä manipuloida isäntänsä kelpoisuutta, jolloin infektoidut naaraat lisääntyvät tehokkaammin. Bakteeri leviää tyypillisesti maternaalisesti iturataa pitkin, mutta voi levitä myös lajilta toiselle horisontaalisesti. Aikaisempien tutkimusten perusteella Manner-Suomen ja Ruotsin hoikkatytönkorentopopulaatioilla esiintyy yleisesti Wolbachia infektioita, toisin kuin Ahvenanmaalla, josta bakteeria ei löydetty lainkaan. Otanta Ahvenanmaalta oli kuitenkin pieni, eikä se siten välttämättä edusta populaation varsinaista infektiostatusta. Lisäksi korentoja loisivien vesipunkkien mahdollisia Wolbachia infektioita tai niiden potentiaalista roolia bakteerin levittämisessä on tutkittu aikaisemmin hyvin vähän. Tutkielmassani analysoin hoikkatytönkorentoja ja niiden punkkeja, jotka on kerätty eri puolilta Ahvenanmaata kesäkuukausien aikana vuosina 2021, 2022 ja 2023. Näytteiden Wolbachia infektiostatuksen selvittämiseksi käytin PCR-tekniikkaa, monistaen yhden mitokondriaalisen lokuksen (COI) ja kolme Wolbachia lokusta (fbpA, wsp ja ftsz). Sekvenssien analysointiin käytin MEGA v.11 ohjelmaa. Laajemman otannan perusteella alle puolella Ahvenanmaan hoikkatytönkorennoista on Wolbachia infektio (41.51 %). Populaatiossa esiintyy ainakin kolmea eri Wolbachia kantaa, joista yksi vastaa Ruotsissa ja toinen Manner-Suomessa esiintyvää bakteerikantaa. Lisää tutkimusta tarvitaan selvittämään, miksi bakteeri ei ole yhtä yleinen Ahvenanmaalla kuin naapuripopulaatioissa, ja millaisia vaikutuksia bakteerilla on hoikkatytönkorennon ekologiaan ja evoluutioon. Noin puolen millimetrin pituisten vesipunkkien infektiostatus jäi epäselväksi lähinnä DNA:n eristämiseen ja monistamiseen liittyvien haasteiden vuoksi.
  • Tolvanen, Kristiina (2020)
    Ecophysiology and ecology in plants are strongly affected by the conditions surrounding them. Adaptation aids plants to survive and to succeed in the prevailing conditions. Winter is a challenge to plants, particularly in northern latitudes and higher altitudes, because it exposes plants to cold and drought, for example. Plants survive from winter on species level with the help of genetic adaptations and as individuals also with the help of acclimation. Woodland strawberry (Fragaria vesca) has been observed to grow separate winter leaves. This allows it to continue photosynthesis in mild conditions during winter, thus improving its energy balance, and to start growing earlier than other species in the spring, which is beneficial in interspecific competition. Fragaria vesca is a species that has wide distribution in the northern hemisphere, and its genotypes are found from very different locations and conditions. However, adaptive traits such as producing a new set of leaves for winter can turn out to be a disadvantage if environmental conditions change rapidly. Climate change brings about changes that are difficult to predict, and these changes are advancing at a fast pace when compared to the developmental history of plants. The aim of this thesis was to study the effect of temperature on summer and winter leaf development, stolon formation and summer and winter leaf chlorophyll, flavonol and anthocyanin content in different Fragaria vesca genotypes. Leaf chlorophyll and secondary compound content give information about leaf development and stress reactions in plants. Plants are known to produce anthocyanins in order to protect the photosynthetic apparatus during chlorophyll recovery in leaf senescence. Anthocyanins are also produced as a response to low temperatures. Research increases knowledge of the ecophysiological and winter ecology-related processes in Fragaria vesca and in the commercially valuable Rosacea-family as well as provides information about the possible responses of these organisms to climate change. Material for the study consisted of twelve European Fragaria vesca genotypes, which had originally been collected from five countries: Norway, Finland, Germany, Italy and Spain. The genotypes had been collected from different latitudes, and they also expressed altitudinal differences. In this study, these genotypes were kept in two temperature treatments, warm (+16°C) and cold (+11°C/six weeks, after which +6°C/four weeks) at a greenhouse. Leaf development was studied by measuring summer and winter leaf middle leaflet width and length, and petiole length. Stolons from each plant individual were counted on a weekly basis and observations about stolon production in relation to the timing of summer leaf senescence and winter leaf development were made at the same time. Leaf chlorophyll and secondary compound content was measured with a Dualex-meter, which provided values for chlorophyll, flavonol and anthocyanin content. The underlying assumption was that cold temperature would induce winter leaf development and summer leaf senescence. The results show that there were differences in summer leaf size between genotypes. Winter leaves had differences between genotypes, but also within genotypes at different temperature treatments. Stolon count was lower and stolon production ceased slightly earlier in the cold treatment. Moreover, summer leaf chlorophyll content decreased in both treatments, but the summer leaves senesced earlier in the warm room. Summer leaf flavonol and anthocyanin values were generally higher in the cooler temperature treatment. Anthocyanins were also produced by winter leaves in the cooler temperature treatment. Based on the results, Fragaria vesca genotypes had differences related to their origin, but temperature also had an effect on winter leaf development, stolon production and the production of secondary compounds. The effect of cold temperature on the size of developing winter leaves was clear. In the cooler temperature treatment, the winter leaves were smaller than in the warmer treatment. The anthocyanin content of summer leaves was higher than in the winter leaves, and the summer leaf anthocyanin content was higher in the colder temperature treatment, where the stress related to the photosynthetic apparatus and low temperatures was combined. Nevertheless, lower temperature did not explain all the responses observed in the genotypes of the study, and thus it is likely that acclimation and winter leaf development in Fragaria vesca are affected by some other factor in addition to temperature, e.g. light regime. A possible continuation for this work would be to study the effect of light conditions or milder winters on winter leaf development in Fragaria vesca genotypes and on the physiology of the species.